BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D12SP1|AL429225
(993 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1080 977 0.0
3x_Contig1247 516 e-146
>3x_Contig1080
Length = 4249
Score = 977 bits (485), Expect = 0.0
Identities = 569/608 (93%), Gaps = 3/608 (0%)
Strand = Plus / Minus
Query: 1 gatcttggaagaagta-ttaatggaaagattccacgctcatagacccatgataaaaagat 59
|||||| ||||| ||| ||| ||| ||||||||||||||||||||||||||||| |||||
Sbjct: 617 gatcttcgaagacgtagttactggcaagattccacgctcatagacccatgataacaagat 558
Query: 60 ttgagcctcamtcttgttatacttctttgaaaattcagcgatatattggtaaaaaggtag 119
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 557 ttgagcctcactcttgttatacttctttgacaattcagcgatatattggtaaaaaggtag 498
Query: 120 gttatmagcatcttctggtcttctttgcaaaggacctaatggtgagtaggcstcaagtaa 179
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 497 cttatcagcatcttctggtcttctttgcaaaggacctaatggtgagtaggcctcaagtaa 438
Query: 180 aataaaattcttttgamtgaattmaamaatamcgggagtttgattttgcaagaatggaga 239
|||| |||||||||| |||||| || |||| ||||||||||||||||||||||||||||
Sbjct: 437 aataccattcttttgactgaattcaacaataccgggagtttgattttgcaagaatggaga 378
Query: 240 gaattcaatttggttcammtgcggtttaamctctgcvactgcaagcaatttctccaaat- 298
|||||||||||||| |||||||||| |||||| ||||||||||||||||||||||
Sbjct: 377 gaattcaatttggtctccctgcggtttaacctctgccactgcaagcaatttctccaaatg 318
Query: 299 mttttamagcaaagtttgaaamaccgatgttcttagcctttccagamttgtatagttctt 358
||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 317 cttttacagcaaagtttgaaacaccgatgttcttagcctttccagacttgtatagttctt 258
Query: 359 ccaaatacttcmaattagcctcgacatcmaatttgctttccttaattata-ggagagtgc 417
||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 257 ccaaatacttccaattagcctcgacatccaatttgctttccttaattatagggagagtgc 198
Query: 418 aatagataaaagtmcacgtaatcaamaccgagcttcttcaatgatgtctctaaggsaact 477
|||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 197 aatagatacaagtccacgtaatcaacaccgagcttcttcaatgatgtctctaaggcaact 138
Query: 478 ttagggttctcagaaagctgtttcaaagtagaatamttgtnagtgatgaagatttcatct 537
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 137 ttagggttctcagaaagctgtttcaaagtagaatacttgtcagtgatgaagatttcatct 78
Query: 538 cttggcttctttgtatccttcaaagcggcacccaattcaggataagttctgtatatmtct 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 77 cttggcttctttgtatccttcaaagcggcacccaattcaggataagttctgtatatctct 18
Query: 598 gcagcatc 605
||||||||
Sbjct: 17 gcagcatc 10
>3x_Contig1247
Length = 7218
Score = 516 bits (256), Expect = e-146
Identities = 413/466 (88%), Gaps = 1/466 (0%)
Strand = Plus / Plus
Query: 529 atttcatctcttggcttctttgtatccttcaaagcggcacccaattcaggataagttctg 588
|||||||||| | ||||||| ||||||||||| | |||||||| || |||| ||||
Sbjct: 268 atttcatctcatttcttctttttatccttcaaatcttcacccaatacattataatttctt 327
Query: 589 tatatmtctgcagcatcaatgtgcacaacacctgggacagtatccaatgttttcttcaca 648
||||| || || || |||| | |||||||||| ||| |||||||| |||||||||||
Sbjct: 328 tatatcacttcatcaccaattttcacaacaccttttacattatccaattttttcttcaca 387
Query: 649 atatcaaccaatggttgggagaaagtggcatctgtctcctcgcttttgtaccaagcagta 708
|||||||||||| || | ||| | ||||| ||||||| ||||| |||||| || ||
Sbjct: 388 atatcaaccaattttttttataaattttcatctttctcctctcttttttaccaatcatta 447
Query: 709 cctgtacctacaatagcaactgcaggaatcttatttccattagacaaagtaaagaacttt 768
||| ||||||||||| ||||| || |||||||||||||||| ||||| |||| ||||||
Sbjct: 448 cctttacctacaatatcaacttcattaatcttatttccattatacaaattaaataacttt 507
Query: 769 tgagtagtcatgatattaattataagcctggtgaacctgatgaatgtggtttccgacggt 828
| | || |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttattattcattatattaattataagcctggtgaacctgatgaatgtggtttccgacggt 567
Query: 829 gtggaatgcttattagtgttgaatgaagtaacaattgaaattgtatagacaacaattgat 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtggaatgcttattagtgttgaatgaagtaacaattgaaattgtatagacaacaattgat 627
Query: 889 ttccgctcccaacagttgtattagggtataaaaamgctccccttttatatgttcggctca 948
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 628 ttccgctcccaacagttgtattagggtataaaaacgctccccttttatatgttcggctca 687
Query: 949 aattgatgcaaccgcagttgccggtgtcgagttaa-aawcgcgtgc 993
||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 688 aattgatgcaaccgcagttgccggtgtcgagttaacaatcgcgtgc 733
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7005
Number of Sequences: 1807
Number of extensions: 7005
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 2
length of query: 993
length of database: 10,358,551
effective HSP length: 16
effective length of query: 977
effective length of database: 10,329,639
effective search space: 10092057303
effective search space used: 10092057303
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)